Our Research
Check the list of our publications
Our Team has been working in the field of human genomics for almost 10 years. We have a number of research papers and articles published about working with genomics data at scale.
For the full list of our publications, please visit our profiles on Google Scholar or reach out to us at info@zettagene.com.
Publications
2025
polars-bio — Fast, scalable and out-of-core operations on large genomic interval datasets
Wiewiórka M., Khamutou P., Zbysiński M. & Gambin T.
Bioinformatics, 41(12), btaf640 (2025)
polars-bio: High-Performance Python DataFrame Operations for Genomics
Wiewiórka M., Khamutou P., Zbysiński M. & Gambin T.
ASHG 2025, Boston, Oct 14-19 2025
2024
PhenoAgent — Agent-based architecture for high-throughput deep phenotyping with Large Language Models
Wiewiórka M., Sitek W., Małanij R. & Gambin T.
Symposium of the Polish Bioinformatics Society, Warsaw, Poland, Sep 13, 2024
2023
Distributed algorithms and computational methods for scalable processing of high-throughput sequencing data
Wiewiórka M.
PhD Thesis (2023)
Cloud-native distributed genomic pileup operations
Wiewiórka M., Szmurło A., Stankiewicz P. & Gambin T.
Bioinformatics, 39(1) (2023)
2019
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
Wiewiórka M., Szmurło, A., Kuśmirek W. & Gambin T.
GigaScience, 8(8), giz094 (2019)
SeQuiLa: An elastic, fast and scalable SQL-oriented solution for processing and querying genomic intervals
Wiewiórka M., Leśniewska A., Szmurło A., Stępień K., Borowiak M., Okoniewski M. & Gambin T.
Bioinformatics, 35(12), 2156-2158 (2019)
2017
Benchmarking distributed data warehouse solutions for storing genomic variant information
Wiewiórka M. S., Wysakowicz D. P., Okoniewski M. J. & Gambin T.
Database, 2017, bax049 (2017)